Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 82.8 bits (203), Expect = 9e-21
 Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 7/250 (2%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M++  L++F  + +  + S  A  +H  PS L+ +I++LEQDLG  LF+R+   + L+PA
Sbjct: 1   MDLVQLEIFKAVAEQGSISAAAQLIHRVPSNLTTRIKQLEQDLGVELFIREKSRLRLSPA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
               L  A RI+   ++    +    +E +G   L    + +   +P LL+++  KH  +
Sbjct: 61  GWNFLGYARRILDLVQEARATV--AGEEPQGAFALGSLESTAAVRIPALLAAYNQKHTKV 118

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDE 180
           E  L TG     I+ +L      A    P  L + +E   + E  + VIAPL  +     
Sbjct: 119 ELDLSTGPSGTMIEGVLSGRLTAAFVDGP-LLHATLEGVAVFEEEMVVIAPLHHA----P 173

Query: 181 LQKEQPDWNEIPFIVPESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGVGI 240
           + + Q    E  +    + + R     WF Q    P    +I  +  +++ V+ G G+ +
Sbjct: 174 ITRGQDVNGESIYTFRSNCSYRHHLERWFSQDGAVPGKIFEIESYHGMLACVSAGAGLAL 233

Query: 241 APDVVINNSP 250
            P  ++++ P
Sbjct: 234 MPRSMLDSMP 243