Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 82.8 bits (203), Expect = 9e-21
 Identities = 63/244 (25%), Positives = 114/244 (46%), Gaps = 5/244 (2%)

Query: 2   NIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPAA 61
           ++  L+LF+H+ +  + ++ A    LSP+A S +I+ LE  L   L  RD+R VE+TPA 
Sbjct: 4   DLADLRLFIHIAESPSLTQGAKRAFLSPAAASARIKALEGQLDTRLLYRDSRGVEITPAG 63

Query: 62  HQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYIE 121
            +LL  A  I+       +E      +  G I++F + TA    LPE+L+ F  + P + 
Sbjct: 64  ERLLHHARLIMRQVDYLKSEFTQYGVDSAGHIRIFANTTAVTEFLPEVLAGFLSERPGVT 123

Query: 122 FKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLG--ISSFMD 179
             L        +  +L   +D+ I A P +  S ++    S   L ++ P+G  ++    
Sbjct: 124 VDLQERLSRDIVRGVLDGTSDMGIIAGPVE-ASGLQVLHFSTDKLVLMVPVGHPLAGQAS 182

Query: 180 ELQKEQPDWNEIPFIVPESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGVG 239
              ++   +  I   + E  T         +++    ++  Q++  EAI  +V  G G+G
Sbjct: 183 VTLEQTLAYQHIG--LHEGSTLLSFLREHVERLGKHLSLRIQVSSFEAICRMVEAGVGIG 240

Query: 240 IAPD 243
           I P+
Sbjct: 241 IIPE 244