Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 76/260 (29%), Positives = 114/260 (43%), Gaps = 27/260 (10%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M+I+  + F+ +   +NF++ A  + ++P  LSRQIQ +E  LG  LF+R  R V LT A
Sbjct: 1   MDIRHFRYFLAVARQRNFTRAAEQLGIAPPTLSRQIQDMETTLGTRLFVRQQREVSLTEA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGE---IKLFCSVTASYSH-LPELLSSFRLK 116
              LL  A   +   RQF     +  +  RGE   I+L    +A YS  L   + +F   
Sbjct: 61  GAALLIEAEATV---RQFEFAQRNAQRAGRGEIGHIQLGYVASAVYSGLLQRQMQAFVQA 117

Query: 117 HPYIEFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAP----- 171
            P +   +     A     +     DI     P  LP  IE   +      +  P     
Sbjct: 118 FPDVSVNVRECAMATLPGAVADGRVDIGYIRSPMTLPEGIEAVRLDSEGFVLALPQDSWL 177

Query: 172 LGISSF-MDELQKEQPDWNEIPFIVPE--SGTARDRANTWFKQMKIKPNIYAQIAGHEAI 228
           LG+ +   + LQ E        FI+PE  SGT +  A     Q    P +  Q  G  A+
Sbjct: 178 LGLKAIGCEHLQNE-------TFILPEQISGTLQVAA-----QGGYAPRLGPQPGGLVAV 225

Query: 229 VSLVALGCGVGIAPDVVINN 248
           V+LV+LG GV + P  ++ +
Sbjct: 226 VALVSLGQGVAVVPASMVGH 245