Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score = 86.3 bits (212), Expect = 8e-22
 Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 3/239 (1%)

Query: 5   TLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPAAHQL 64
           +L+LF+      +  + A   H++ SAL R++  LE   G  L +R  R V LT A   +
Sbjct: 21  SLRLFIAAARAGSIQRAAQQEHIATSALGRRLADLEHAFGVPLLVRSRRGVTLTEAGQIV 80

Query: 65  LPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYIEFKL 124
                ++  + +    ++     E+RG I+L+ +++A    LPE L SF    P ++  L
Sbjct: 81  FERGVKMDDELQALVRDVQTQGGEVRGTIRLYANMSAIVGFLPERLKSFMAACPNVQISL 140

Query: 125 LTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDELQKE 184
              D    +   L D AD+ +  +   +P  +E  + +  PL V+ P G      E Q  
Sbjct: 141 HEADTRDVVRACLDDRADVGV-GVATAIPPGLESWSFASDPLQVVLPAG-HPLQREKQLG 198

Query: 185 QPDWNEIPFIVPESGTARDR-ANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGVGIAP 242
                + P I    G A D   +  F+ ++++ +    ++  +A+  +V  G G+ + P
Sbjct: 199 LAQLTDQPLIGVHQGGALDSLLHERFEALQLRFSPKVSVSSFDAVCRMVEAGLGIAVIP 257