Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 8/287 (2%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M+   L+ F+ + +  + ++ A  + L+P+ +++QI+ LE D+G  L  R  R+V+ T A
Sbjct: 1   MDTSFLETFVAVAEAGSLAEAARRLDLAPTTVAQQIRALETDIGSQLLRRAGRTVQPTVA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
            +++L  A  ++ + R   +E ++ +    G + L  + TA    L   L  +R  H  I
Sbjct: 61  GNRILARARTLLREVRDLRSEASEHALP-AGPLHLGATPTALMGMLTPALLRWRQVHEDI 119

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPE-QLPSRIEFATISEIPLSVIAPLGISSFMD 179
           E ++  G  A  + K+L  E D A+   P   LP    +  +   PL ++AP  +    D
Sbjct: 120 EIRIEPGTSAALLTKVLAGELDAALLVHPTFALPKTCHWIPLRSEPLILLAPAKL-RVRD 178

Query: 180 ELQKEQPDWNEIPFI-VPESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGV 238
            L     +    PFI    S  A   A+ + +Q  ++P +  ++ G E I  LVA G GV
Sbjct: 179 PLVTAARE----PFIRYDRSVVAGKLADEYLRQHGVRPRVQFELDGIEYIAKLVAEGLGV 234

Query: 239 GIAPDVVINNSPVRDKIQRLSVTPIKPFMLGVCCKRSQLDNPLVQAL 285
            + PD     +P     +     P     +G+   R     PL  AL
Sbjct: 235 SVLPDWATVGAPHPGLKRWPLPAPCPARTVGLLSLRGAARAPLADAL 281