Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., Transcriptional regulator, LysR family from Sphingobium sp. HT1-2

 Score = 78.2 bits (191), Expect = 2e-19
 Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 46/301 (15%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           ++I+ L+ F+ + +  +F + A  +H++   LSRQ+  LEQ+LG  L  R +R   LTPA
Sbjct: 2   IDIRQLRYFVAVAETLHFGRAAERLHVTQPPLSRQVAALEQELGVRLIERHSRRAVLTPA 61

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELR-------GEIKLFCSVTASYSHLPELLSSF 113
                   AR + D RQ    L+   ++ R       GE+ +   + A+YS +P L   F
Sbjct: 62  -------GARFLEDARQIIAALDRACRDARAWQSGDLGELTIGFMMHAAYSSVPLLTRRF 114

Query: 114 RLKHPYIEFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAP-- 171
              HP +   L    P    D ++    D AI   P      +      E PL+ + P  
Sbjct: 115 ATAHPDVTLHLRETLPMMLADGVMEGRFDAAIGFDPGPRRGLVTSPLYRE-PLAAVVPSD 173

Query: 172 --LGISSFM--DELQKEQPDWNEIPFIVPESGTARDRANTWFKQMKIKPNIYAQIAGHEA 227
             L  +S +  D+L  E+       FI+  +             +   P I  +    + 
Sbjct: 174 HHLASASALTPDQLAGER-------FILSPADVTPTLRRAILGWLAAPPAILLETQLQQT 226

Query: 228 IVSLVALGCGVGIAPDVVINNSPVRDKIQRLSVTPIKPFMLGVCCKRSQLDNPLVQALWR 287
           IVSLV  G GV I P          + ++RL++T ++   L        +D P+V+ L  
Sbjct: 227 IVSLVGEGLGVAIVP----------ESLRRLAMTSVRFVPL--------IDAPMVEQLLM 268

Query: 288 V 288
           V
Sbjct: 269 V 269