Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 80.5 bits (197), Expect = 4e-20
 Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 6/247 (2%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M  K L+ F+ +     F++ A  +H+S SA+S+Q+ +LEQD+G  L  R    + LT A
Sbjct: 1   MEFKQLRSFIEVVHRGGFTQAAQTLHISQSAVSKQVAQLEQDVGQPLLERQASHLHLTAA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
              +L     ++   +    EL+D SQ  RGE++L   +  S +    L + +R +HP I
Sbjct: 61  GRIVLERGEALLRQRQALLNELDDLSQMERGELRLGLPMLGSDTLFAGLFAEYRRRHPNI 120

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGIS-SFMD 179
             +LL G        +   E ++     P       ++      PL  + P G + + +D
Sbjct: 121 AIQLLEGGSRSVEQAVRSGELELGGCLTPTD--EAFDYQPFCNEPLDALLPAGHALAGLD 178

Query: 180 ELQKEQPDWNEIPFIV-PESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGV 238
            +   Q    + PF++   S    DR     +Q    P    +    + + +LVA G GV
Sbjct: 179 AVGLGQ--LADTPFLLYQRSFVLNDRLLKACQQQGFTPKEGGRSGQADFLAALVAAGQGV 236

Query: 239 GIAPDVV 245
            + P VV
Sbjct: 237 VMLPRVV 243