Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 10/266 (3%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M  + L  F  + +  N S  A A+HLS  A+S Q++ L++  G  L+ R  R V LT A
Sbjct: 1   MTPEQLITFATVAEHGNISHAAQALHLSQPAVSGQLKLLQEAFGEPLYQRAGRGVRLTAA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQEL-RGEIKLFCSVTASYSHLPELLSSFRLKHPY 119
             QLL  A R+   +RQ    L +  + L RG +++  S T +   LP L++ F  ++P 
Sbjct: 61  GEQLLAHAERLRETFRQ-AQALREAMRGLERGTVRIGASTTPASYLLPYLIADFHGRYPD 119

Query: 120 IEFKLLTGDPAQAIDKILHDEADIAISAMP--EQLPSRIEFATISEIPLSVIAPLGISSF 177
           +      G+ A+ +  +  D  DIA+   P  ++LP   +     E  +  I P G    
Sbjct: 120 VLVSTSHGNTAEIVAAL--DSVDIALIEGPPGQELPLGTQVTPWREDEIVAIVPRG-HPL 176

Query: 178 MDELQKEQPDWNEIPFIVPESGT-ARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGC 236
               Q+        P ++ ESG+  R      F +  +   +  +IAG E +   V  G 
Sbjct: 177 AGSDQQTLAALGAYPLVLRESGSGVRQIVERAFARDGVAMRVALEIAGVEGVKEAVRAGM 236

Query: 237 GVGIAPDVVINNSPVRDKIQRLSVTP 262
           GVG    + I +      + RL V P
Sbjct: 237 GVGFVSAMSIRHED--GALHRLQVAP 260