Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score = 94.7 bits (234), Expect = 2e-24
 Identities = 74/304 (24%), Positives = 136/304 (44%), Gaps = 29/304 (9%)

Query: 3   IKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPAAH 62
           ++ ++ F+ + +  +F + A A+HLS  ALSR+I+KLE+ LG +L  R  R V LT    
Sbjct: 5   LQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLTSVGR 64

Query: 63  QLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYIEF 122
             LP A R++ D+      + + ++   G++ L C  TA++  LP ++  +  ++P I  
Sbjct: 65  DFLPKARRLLDDFEDSILSIRELAERQTGQVTLACIPTAAFYFLPSVIRDYNEQYPKIRI 124

Query: 123 KLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDELQ 182
           +LL       ++ +L  EAD  I+ M  Q P  IEF ++ +             F+   +
Sbjct: 125 RLLDLSANDGLEAVLRGEADFGINMMSGQHPD-IEFVSLVQ-----------EHFVLACR 172

Query: 183 KEQPDWNEIPFIVPE------SGTARDRANTW-----FKQMKIKPNIYAQIAGHEAIVSL 231
           ++ P  N       E       G  R   N          + ++P  + ++      + +
Sbjct: 173 RDHPLANRASVTWTELADYRLIGVGRLSGNRMLLDHALSGLNLRPKWFYEVQHLSTSLGM 232

Query: 232 VALGCGVGIAPDVVINNSPVRDKIQRLSVTPIKPFM---LGVCCKRSQLDNPLVQALWRV 288
           V  G GV   P + + N+   D    +SV  I+P +   LG+  +R    +P  +    +
Sbjct: 233 VEAGLGVSAMPSLAMPNA---DHPTLVSVPLIEPQVTRTLGLVYRRGASLSPAAEKFVSI 289

Query: 289 VSAK 292
           +  K
Sbjct: 290 LLQK 293