Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., Alkanesulfonate utilization operon LysR-family regulator CbI from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 87.0 bits (214), Expect = 5e-22
 Identities = 70/259 (27%), Positives = 116/259 (44%), Gaps = 9/259 (3%)

Query: 1   MNIKTLQLFMHLCDCK-NFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLR-DNRSVELT 58
           MN + L+       C  N ++ A+ ++ S   +SRQI++LE++LG T+F R   R   LT
Sbjct: 1   MNFQQLRSVREAARCGYNLTEVAAMLYTSQPGVSRQIRELEEELGVTIFARAGKRLTGLT 60

Query: 59  PAAHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHP 118
                LLP+  R++ +     +   +    L G + +  + + +   LP  +  FR   P
Sbjct: 61  GPGQTLLPIVERLLQEADNLRSAGKEFVSRLEGGLSIAATHSQARYALPHAVRDFRALFP 120

Query: 119 YIEFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATIS--EIPLSVIAPLGISS 176
            +   L  G P Q  + ++  EADI I+   E L +  +  T+       SV+ P G   
Sbjct: 121 QVTLNLHQGSPKQVAEMLIAGEADIGIAT--EALANYPQLVTLPCYRWTHSVVVPHGHPL 178

Query: 177 FMDELQKEQPDWNEIPFIVPESG-TARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALG 235
              E         E P I  + G T R   +  FK+  ++PN+       + I + V LG
Sbjct: 179 LRVEGPLSLHQLAEHPIITYDLGYTGRSHIDDAFKKQGVQPNVVITAMDADVIKTYVELG 238

Query: 236 CGVGIAPDVVINNSPVRDK 254
            GVGI   + ++  P RD+
Sbjct: 239 MGVGIVASIAVD--PDRDR 255