Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., Transcriptional regulator, LysR family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 64/267 (23%), Positives = 120/267 (44%), Gaps = 6/267 (2%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M ++ L+ F+ L D  +F + A  +H+S   LS  I++LE +LG  L  RD+RSV+LTPA
Sbjct: 1   MELRHLRYFVVLADELHFGRAAKRLHISQPPLSFNIKQLETNLGVQLLERDSRSVKLTPA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
                  A  ++ +  Q   +  D +  +   +++    +  +  LPE L  F+  HP +
Sbjct: 61  GVSFRQSAQLVLAEADQAARKARDVAAGVTTRVRIGFVGSMLFRGLPESLDRFQASHPQV 120

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDE 180
             +L+  + A+ ID +   + D+     P  +PS +  A     P  +  P    +    
Sbjct: 121 RAELVELNSAEQIDALGRGQIDLGFVHTP-NVPSNLSTALYMSEPFVLCTPHRAGARRRP 179

Query: 181 LQKEQPDWNEIPFIVPESGTARD---RANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCG 237
               Q      P ++   G + D   R  T   Q+ + P +  ++    ++V+LV+ G G
Sbjct: 180 RTVAQVAGE--PLVLFSRGASPDYYERVLTLCAQLGLDPAVRHEVRHWLSVVALVSKGTG 237

Query: 238 VGIAPDVVINNSPVRDKIQRLSVTPIK 264
             + P  +++      +   L  +PI+
Sbjct: 238 YALVPQAMMHGGVSAVQFTPLPESPIR 264