Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., HTH-type transcriptional activator IlvY from Serratia liquefaciens MT49

 Score =  294 bits (753), Expect = 1e-84
 Identities = 145/298 (48%), Positives = 205/298 (68%), Gaps = 4/298 (1%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M+++ L+LF+HL +  +F +TA AMH+SPS LSRQIQ+LE+ LG  LFLRDNR+V+LT A
Sbjct: 1   MDLRDLKLFLHLAESHHFGRTAKAMHVSPSTLSRQIQRLEEILGQPLFLRDNRTVQLTDA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
             QL   A + +  ++Q    L      L GE++LFCSVTA+YSHLP +L  FR +HP +
Sbjct: 61  GEQLKDFAQQTLLQYQQLKHSLGQHGPSLSGELRLFCSVTAAYSHLPPILDRFRAQHPLV 120

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDE 180
           E KL TGD A A+DK+  +EAD+ I+  PE LP+ + F  I EIPL +IAP    +   +
Sbjct: 121 EIKLTTGDAADAVDKVQSNEADLGIAGRPETLPTSVAFTKIGEIPLVLIAPALPCAVRSQ 180

Query: 181 LQKEQPDWNEIPFIVPESGTARDRANTWFKQMKI-KPNIYAQIAGHEAIVSLVALGCGVG 239
              EQPDW  IPFI+PE G +R R   WF++ +I  P IYA + GHEAIVS+VALGCG+ 
Sbjct: 181 AFAEQPDWANIPFILPEHGPSRKRIELWFRRQRIANPLIYATVGGHEAIVSMVALGCGIA 240

Query: 240 IAPDVVINNS--PVRDKIQRL-SVTPIKPFMLGVCCKRSQLDNPLVQALWRVVSAKKS 294
           + P VV++NS  PVR++I +L +++ ++PF LGVC ++ +L +PL+ A WR++   K+
Sbjct: 241 LIPGVVVDNSPEPVRNRISQLENISMVEPFELGVCVQKKRLSDPLIDAFWRLLLTVKN 298