Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., LysR family transcriptional regulator YneJ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 60/259 (23%), Positives = 122/259 (47%), Gaps = 13/259 (5%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M++  L++F  +    + ++ A+ +H  PS L+ +I++LE DLG +LF+R+N+ + L+PA
Sbjct: 1   MDLTQLEMFNAVALTGSITQAAAKVHRVPSNLTTRIRQLEADLGVSLFIRENQRLRLSPA 60

Query: 61  AHQLLPVAARI---IHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKH 117
            H  L  + +I   + + R          +E +G   L    + +   +P LL+ +  ++
Sbjct: 61  GHNFLRYSQQILALVDEARMVVA-----GEEPQGLFSLGALESTAAVRIPALLAGYNQRY 115

Query: 118 PYIEFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSF 177
           P I+F L TG     +D +L  + + A    P   P  +E     +  + ++AP G S  
Sbjct: 116 PKIQFALTTGPSGAMLDGVLEGKLNAAFIDGPLMHPG-LEGIPAYQEEMMIVAPHGHS-- 172

Query: 178 MDELQKEQPDWNEIPFIVPESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCG 237
           +     E   +N   F    + + R    +WF      P    ++  +  +++ V  G G
Sbjct: 173 VVSRASEVNGYNIYAF--RANCSYRRHFESWFHADGATPGTIHEMESYHGMLACVIAGAG 230

Query: 238 VGIAPDVVINNSPVRDKIQ 256
           + + P  ++N+ P   +++
Sbjct: 231 IALMPASMLNSMPGHHQVE 249