Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Transcriptional regulator, LysR family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 75/244 (30%), Positives = 111/244 (45%), Gaps = 16/244 (6%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           MNIK L  F+ LCD  ++ + AS + ++  +LS+QI++LE  L   LF R  R ++LT A
Sbjct: 1   MNIKQLHSFLILCDELHYGRAASRLFITQPSLSQQIKQLESSLKTILFKRKGRGIKLTKA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
              L   A +I+ D +    EL     + R  I +   V+ SY  LP    +F   HP I
Sbjct: 61  GIILQRHANKIMLDLKNAENELLPYQDQQRDTISI--GVSGSYLVLP-AFRNFMAHHPEI 117

Query: 121 EFKLLTGDPAQAIDKILHDEADIAI---SAMPEQLPSRIEF--ATISEIPLSVIAPLGIS 175
              +      Q I K+     DI I   +A+P QL S + F    I+ IPLS   PL   
Sbjct: 118 SLNVKEFSTEQTIKKLTDSAVDIGIVYRTALPAQLSSTMLFEDEIIAAIPLS--HPLATR 175

Query: 176 SFMDELQKEQPDWNEIPFIV-PESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVAL 234
                 +    D N+ P IV  +S   R    T F   K+ PN+  ++  H + +     
Sbjct: 176 E-----RLHLKDLNDQPIIVLNDSLLLRGIITTEFNNRKVVPNVICELDNHYSCLEYAEA 230

Query: 235 GCGV 238
             G+
Sbjct: 231 QIGI 234