Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., Uncharacterized HTH-type transcriptional regulator YbhD from Escherichia coli ECRC62

 Score = 82.8 bits (203), Expect = 9e-21
 Identities = 68/293 (23%), Positives = 132/293 (45%), Gaps = 13/293 (4%)

Query: 3   IKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPAAH 62
           + +++ F+ L +  +F+  A  ++++  AL+R+I+K+E+DL   LF R  R V LT A  
Sbjct: 5   LSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGK 64

Query: 63  QLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYIEF 122
           +LLP A  +I  + +    + D +   RG + L C  TA +  LP  +  F   +P I+ 
Sbjct: 65  RLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKV 124

Query: 123 KLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDE-- 180
           ++L       ++ +L +E+D  I+ M     S I+F  +      V  P  ++   D   
Sbjct: 125 RILEQGTNNCMESVLCNESDFGIN-MNNVTNSSIDFTPL------VNEPFVLACRRDHPL 177

Query: 181 LQKEQPDWNEI----PFIVPESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGC 236
            +K+  +W E+       V  S   R            K + + ++      + LV  G 
Sbjct: 178 AKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGL 237

Query: 237 GVGIAPDVVINNSPVRDKIQRLSVTPIKPFMLGVCCKRSQLDNPLVQALWRVV 289
           G+   P + + ++P    I    V P+    LG+  ++  + +P  +  + ++
Sbjct: 238 GISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALL 290