Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., LysR family transcriptional regulator from Dickeya dadantii 3937

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 67/290 (23%), Positives = 126/290 (43%), Gaps = 19/290 (6%)

Query: 3   IKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPAAH 62
           ++ ++ F+ + D   F+K +  +H+S  AL+R+I+KLE+ LG TLF R  R V LT    
Sbjct: 5   LQGIKAFVKIADTGCFTKASELLHISQPALTRRIKKLEESLGTTLFERSTRRVSLTAVGK 64

Query: 63  QLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYIEF 122
             LP A  +I  +      + + +    G + L C  TA++  LP ++ ++   +P I  
Sbjct: 65  SFLPNARNLIDFYENSILNIQEMASHQTGFVTLSCIPTAAFYFLPAVIRNYNEHYPNIRI 124

Query: 123 KLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIA----PLGISSFM 178
           ++L    +  +D +L+ +AD  I+ M       +EF  +   P  +      PL   S +
Sbjct: 125 RILEHSASDCLDAVLNGDADFGIN-MINVTHFNVEFTPLVNEPFVLACRRDHPLAKKSLV 183

Query: 179 DELQKEQPDWNEIPFIVPESGTARDRANTWFKQMKI-----KPNIYAQIAGHEAIVSLVA 233
             + +E  D+       P  G  R   N    +  +     KPN + ++      + +V 
Sbjct: 184 --MWEELADY-------PLIGVRRSSGNRLLIEQALENSAWKPNWFYEVRHLSTSLGMVE 234

Query: 234 LGCGVGIAPDVVINNSPVRDKIQRLSVTPIKPFMLGVCCKRSQLDNPLVQ 283
            G G+   P + +        + +  + P+    LGV  ++     P  +
Sbjct: 235 AGLGIAAVPSLAMPRDEHHVLVSKPLIEPVVRRTLGVVQRKDSTLTPAAE 284