Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., hca operon transcriptional regulator from Escherichia coli BL21

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 67/250 (26%), Positives = 112/250 (44%), Gaps = 6/250 (2%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M ++ L+ F+ +    NF++ A  +H S  +LS QI+ LE  +G  L +RD R V LT A
Sbjct: 1   MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
               L  A  I+              QE R ++ +    +A  + LP++L  FRL+ P  
Sbjct: 61  GECFLQDALAILEQAENAKLRARKIVQEDR-QLTIGFVPSAEVNLLPKVLPMFRLRQPDT 119

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDE 180
             +L++    Q  +KI   E D+ +   P   P  I++  + + PL V+ P+       E
Sbjct: 120 LIELVSLITTQQEEKIRRGELDVGLMRHPVYSP-EIDYLELFDEPLVVVLPVD-HPLAHE 177

Query: 181 LQKEQPDWNEIPFIVPE---SGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCG 237
            +      + + F+  +   SG+       WF Q   +PNI          ++LV +G G
Sbjct: 178 KEITAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLG 237

Query: 238 VGIAPDVVIN 247
           V + P  + N
Sbjct: 238 VTLIPGYMNN 247