Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 65/292 (22%), Positives = 127/292 (43%), Gaps = 24/292 (8%)

Query: 3   IKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPAAH 62
           I  L+ F  + + ++F + A A+H+S  AL+R+IQKLEQ +G  L  R  R V  T    
Sbjct: 7   ILDLRAFQAVVELESFHRAADALHISQPALTRRIQKLEQAIGAPLLERTTRHVAPTAMGQ 66

Query: 63  QLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYIEF 122
           +++P+  R++ ++      + D +Q  RG I + C  TA++  LP ++ +F  ++P+I  
Sbjct: 67  EVMPLVRRMLEEFDGSLFAMKDGAQR-RGLITMACVPTAAFYFLPTVIKTFSKQYPHIRL 125

Query: 123 KLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGISSFMDELQ 182
           ++      + +  +   E +  I+ M    P                 PL    F+  ++
Sbjct: 126 RIRDLTANEGLQAVARGEVEFGINLMGNSDPD------------LAFEPLIDDPFVLAMR 173

Query: 183 KEQP-------DWNEIP----FIVPESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSL 231
           K+ P        W+++      +V  S   R   +    +  +K N + ++      + L
Sbjct: 174 KDHPLAAFETIQWDQLEPHPLVVVDRSSGNRTLLDGALARHNLKLNWFYEVTHLNTSLGL 233

Query: 232 VALGCGVGIAPDVVINNSPVRDKIQRLSVTPIKPFMLGVCCKRSQLDNPLVQ 283
           V  G G+ + P +          + R  V P+    +G+  +RS   +P  +
Sbjct: 234 VEAGLGISVLPRLATPQDEHPFLVTRPIVNPVVSRTIGIVQRRSSALSPAAE 285