Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., HTH-type transcriptional activator CmpR from Acinetobacter radioresistens SK82

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 9/262 (3%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           MN+   + F+ + +  + S+ A  + ++  A++++I  LE   G  LF    R V+ T A
Sbjct: 1   MNLAAFEAFVKVMETGSISQAAEQLFITQPAVTKRIHSLEDYFGVKLFESAGRGVQATHA 60

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
           AH LLP     +++       L+ +  +++G +K+  S      HLP  L  +  + P +
Sbjct: 61  AHSLLPKVKNWLNELGDIHHTLSHEQSQVQGRLKIGTSHHIGLHHLPHHLKKYVQQFPDV 120

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPL-SVIAPLGISSFMD 179
              +   D  QA +++L  + ++A   +P Q  SR+ ++TI   PL  V AP  + +   
Sbjct: 121 TLDVHFVDSEQAHEQVLAGDLELAFLTLPPQGDSRLNYSTIWNDPLVFVAAPFHLLAQRS 180

Query: 180 ELQKEQPDWNEIPFIVPESGTARDRAN-TWFKQMKIKPNIYAQIAGHEAIVSLVALGCGV 238
            L+ E  D    P ++P   T   +     F++  +KP I       E+I  LV++G G 
Sbjct: 181 NLKLE--DLIAYPSLLPSIQTYTSQITLAEFEKKGLKPKITMSNNPLESIRMLVSIGLGW 238

Query: 239 GIAPDVVINNSPVRDKIQRLSV 260
            + P  +IN       +QRL +
Sbjct: 239 SVLPQNLINQD-----LQRLDI 255