Pairwise Alignments

Query, 152 a.a., RNA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 154 a.a., splicing factor, CC1-like family from Alteromonas macleodii MIT1002

 Score =  104 bits (260), Expect = 5e-28
 Identities = 56/137 (40%), Positives = 81/137 (59%), Gaps = 6/137 (4%)

Query: 11  ALLAVIGAGILSQLTLHS------SFAFLIGVVATALICKLSTHPTLSSSEDEEASSTTK 64
           A+ A+ G  + S  +L+       S A LI  + T  +  L   P+ S +       + +
Sbjct: 13  AIFAIAGYLLFSSASLNVHVPLTVSAALLISGIVTPWLASLIQSPSSSDARAHSNDGSVE 72

Query: 65  TLYVGNLPYKANESHVKELFAEFGEVFAVRLMKDKRTGKRRGFGFVVIAASQAQTAIDAL 124
           TLYVGNLPY+ANE+ VKE F+ F EV +VRLMKD++TGKR+G+GF+ +      + ID  
Sbjct: 73  TLYVGNLPYRANENAVKEYFSSFIEVQSVRLMKDRKTGKRKGYGFIEVVTDDLNSVIDKT 132

Query: 125 NEKEYMQRTLKVRIAND 141
           N+  + +RTLKVR A D
Sbjct: 133 NDSIFQERTLKVRPAKD 149