Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., class I SAM-dependent RNA methyltransferase from Magnetospirillum magneticum AMB-1

 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 26/153 (16%)

Query: 216 ELYCGNGNFSLALAQNFERVLATELAKP--SVEAAQFNIAANQIGNVQIIRMSAEEFTQA 273
           +LY G G+FSL LA          L  P  +VE  Q  +AA +       R ++   T  
Sbjct: 299 DLYSGCGSFSLPLA----------LRGPVRAVEGEQGPVAALEAA----ARAASLPLTAE 344

Query: 274 MEGKREFNRLKDAGVDLQSYRCNTIFVDPPRSGMDIDTCKMVQ----GYERILYISCNPE 329
           +   R+  R   A  +L+ +R   I +DPPR+G      ++ +    G   I  +SCNP 
Sbjct: 345 V---RDLARRPLAAHELKGFRA--IVLDPPRAGAAAQAAELARPSPGGPTTIAMVSCNPA 399

Query: 330 TLQENLQVLGE-THQVVRFALFDQFPYTHHMEA 361
           TL  +L+ L +   ++ R    DQFP++ H+EA
Sbjct: 400 TLARDLRTLCDGGWRIKRVVPIDQFPWSAHLEA 432