Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Erwinia tracheiphila SCR3

 Score = 61.2 bits (147), Expect = 4e-14
 Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 21/182 (11%)

Query: 187 SFTQPNAKVAEKMLEWAVDCTQE-SKGDLLELYCGNGNFSLALAQNFERVLATELAKPSV 245
           SF Q N +VA  +   A     E     + +L+CG G F L  A    ++   E++  ++
Sbjct: 209 SFFQTNPEVAALLYATARQWVSELGVRTMWDLFCGVGGFGLHCASPEMQLTGIEISAEAI 268

Query: 246 EAAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRS 305
             A+ +  A ++  V    + + +F        E                  + V+PPR 
Sbjct: 269 NCARRSATAMKLDKVSFAALDSTDFASGENATPEL-----------------VLVNPPRR 311

Query: 306 GMDIDTCKMV--QGYERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHMEAGV 363
           G+    C+ +   G + ILY SCN +TL  ++ ++ + +++ +  LFD FP+T H E   
Sbjct: 312 GIGAQLCQWLSSMGPKWILYSSCNAQTLAIDIALMSD-YKLEKVQLFDIFPHTGHSEVLT 370

Query: 364 ML 365
           +L
Sbjct: 371 LL 372