Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., tRNA (uracil(54)-C(5))-methyltransferase from Enterobacter asburiae PDN3

 Score =  479 bits (1234), Expect = e-140
 Identities = 232/361 (64%), Positives = 295/361 (81%), Gaps = 6/361 (1%)

Query: 9   ELYQAQLADKIARLKAMFVDYSMPELEVFESPVANYRMRAEFRIWHEGDDMYYIMFNQET 68
           E Y AQLA+K+ RL++M   ++ P  EVF SPV++YRMRAEFRIWH+GDD+Y+I+F+Q+T
Sbjct: 9   EQYDAQLAEKVVRLQSMMTPFNAPVPEVFRSPVSHYRMRAEFRIWHDGDDLYHIIFDQQT 68

Query: 69  REKYRVDQFPAASRLINDLMPLLMDAMKGSPILRHKLFQVDFLSTLSGEILVSLLYHRQL 128
           + + RVD FPAAS LIN LM L+MD ++ +P+LR+KLFQ+D+L+T S + ++SLLYH+ L
Sbjct: 69  KSRIRVDSFPAASELINQLMTLIMDGVRNNPLLRNKLFQIDYLTTQSNQAIISLLYHKAL 128

Query: 129 SEEWITAAQALKQRLND----EGFNLNLIGRARKMKVVLDRDYVVENLQVNGQPYVYKQV 184
           ++EW   A+AL+  L D    +  N++LIGRA K K++LD+DY+ E L V G+  VY+QV
Sbjct: 129 NDEWREQAEALRDALRDALRAQNINVHLIGRATKTKIMLDQDYIDERLPVAGKEMVYRQV 188

Query: 185 ENSFTQPNAKVAEKMLEWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATELAKPS 244
           ENSFTQPNA +  +MLEWA+  T+ S GDLLELYCGNGNFSLALA+NF+RVLATE+AKPS
Sbjct: 189 ENSFTQPNAAMNVQMLEWALKATEGSTGDLLELYCGNGNFSLALARNFDRVLATEIAKPS 248

Query: 245 VEAAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPR 304
           V AAQ+NIAAN I NVQIIRM+AEEFTQAM G R+FNRL+  G+DL+SY+C TIFVDPPR
Sbjct: 249 VAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVRQFNRLE--GIDLKSYQCETIFVDPPR 306

Query: 305 SGMDIDTCKMVQGYERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHMEAGVM 364
           SG+D +T KMVQ Y RILYISCNPETL +NL+ LG+TH+V R ALFDQFPYTHHME GV+
Sbjct: 307 SGLDSETEKMVQAYPRILYISCNPETLCKNLETLGQTHKVERLALFDQFPYTHHMECGVL 366

Query: 365 L 365
           L
Sbjct: 367 L 367