Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., 23S rRNA (uracil-5-)-methyltransferase RumB from Enterobacter asburiae PDN3

 Score = 57.4 bits (137), Expect = 6e-13
 Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 21/186 (11%)

Query: 187 SFTQPNAKVAEKMLEWAVDCTQESK-GDLLELYCGNGNFSLALAQNFERVLATELAKPSV 245
           SF Q N  VA  +   A D  +      + +L+CG G F L  A    ++   E++  ++
Sbjct: 209 SFFQTNPTVASSLYATARDWVRALNIQHMWDLFCGVGGFGLHCATPEMQLTGIEISAEAI 268

Query: 246 EAAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRS 305
             A+ + A   + N+    + + +F        E                  + V+PPR 
Sbjct: 269 ACAKQSAAGLGLTNLHFQALDSTQFATGQGNVPEL-----------------VLVNPPRR 311

Query: 306 GMDIDTCKMVQGY--ERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHMEAGV 363
           G+    C  +     E I+Y SCN +T+ +++  L   +++ R  LFD FP+T H E   
Sbjct: 312 GIGKSLCDYLSQMAPEYIVYSSCNAQTMAKDIGSL-PGYRIERVQLFDMFPHTAHYEVLT 370

Query: 364 MLERKK 369
           +L + +
Sbjct: 371 LLVKTR 376