Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Dickeya dianthicola ME23

 Score =  487 bits (1254), Expect = e-142
 Identities = 237/359 (66%), Positives = 290/359 (80%), Gaps = 2/359 (0%)

Query: 11  YQAQLADKIARLKAMFVDYSMPELEVFESPVANYRMRAEFRIWHEGDDMYYIMFNQETRE 70
           Y AQL +K  RL AM   +  P   VF SPV++YRMRAEFRIWH+GDD+Y+I+F+Q+T++
Sbjct: 11  YDAQLEEKTGRLGAMMAPFDAPAPAVFRSPVSHYRMRAEFRIWHDGDDLYHIIFDQQTKQ 70

Query: 71  KYRVDQFPAASRLINDLMPLLMDAMKGSPILRHKLFQVDFLSTLSGEILVSLLYHRQLSE 130
           + RVDQFPAAS LIN LMP L+ A++  P+LR KLFQ+D+LSTLSGEI VSLLYH+ L +
Sbjct: 71  RIRVDQFPAASELINRLMPALLSALRAEPVLRRKLFQIDYLSTLSGEIAVSLLYHKALDD 130

Query: 131 EWITAAQALKQRLNDEGFNLNLIGRARKMKVVLDRDYVVENLQVNGQPYVYKQVENSFTQ 190
           EW   A+ L+ +L ++GF L L+GRA K K+ LDRDYV E L V G+  +Y+QVENSFTQ
Sbjct: 131 EWQQHARLLRDQLREQGFALQLMGRATKTKICLDRDYVDECLPVAGRQMIYRQVENSFTQ 190

Query: 191 PNAKVAEKMLEWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATELAKPSVEAAQF 250
           PNA +  +MLEWA+  TQ S GDLLELYCGNGNFSLALA+NFERVLATE+AKPSV AAQ+
Sbjct: 191 PNAMMNIQMLEWALSVTQGSTGDLLELYCGNGNFSLALARNFERVLATEIAKPSVAAAQY 250

Query: 251 NIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRSGMDID 310
           NIAANQI NVQIIRM+AEEFTQAM G R+FNRL+  G+DL  YRC TIFVDPPRSG+D  
Sbjct: 251 NIAANQIDNVQIIRMAAEEFTQAMNGVRQFNRLQ--GIDLAGYRCETIFVDPPRSGLDDG 308

Query: 311 TCKMVQGYERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHMEAGVMLERKK 369
           T K+VQ Y RILYISCNPETL+ NL+ L +TH++ + ALFDQFPYTHHME GV+LE+++
Sbjct: 309 TVKLVQAYPRILYISCNPETLRANLETLSQTHRISQLALFDQFPYTHHMECGVLLEKRQ 367