Pairwise Alignments

Query, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Bacteroides ovatus ATCC 8483

 Score = 77.8 bits (190), Expect = 6e-19
 Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 24/202 (11%)

Query: 176 GQPYVYKQVEN--------SFTQPNAKVAEKMLEWAVDCTQESKGDLL-ELYCGNGNFSL 226
           G+ ++++++E         SF Q N++ A  + + A +    +  +L+ +LY G G  + 
Sbjct: 282 GKDHIFEEMEGLRFKVGPKSFYQTNSEQAYNLYKVAREFAGLTGNELVYDLYTGTGTIAN 341

Query: 227 ALAQNFERVLATELAKPSVEAAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDA 286
            +++   +V+  E    ++E A+ N   N I N        ++        ++F      
Sbjct: 342 FVSRQARQVIGIEYVPEAIEDAKVNAEINDIKNALFYAGDMKDILT-----QDFIN---- 392

Query: 287 GVDLQSYRCNTIFVDPPRSGMDIDTCKMVQGYE--RILYISCNPETLQENLQVLGETHQV 344
               Q  R + I  DPPR+GM  D   ++   E  RI+Y+SCNP T   +LQ+L E ++V
Sbjct: 393 ----QHGRPDVIITDPPRAGMHQDVVDVILFAEPKRIVYVSCNPATQARDLQLLDEKYKV 448

Query: 345 VRFALFDQFPYTHHMEAGVMLE 366
                 D FP+THH+E  V+LE
Sbjct: 449 KAIQPVDMFPHTHHVENVVLLE 470