Pairwise Alignments

Query, 213 a.a., HTH-type transcriptional repressor FabR from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., Transcriptional regulator, TetR family from Pseudomonas putida KT2440

 Score =  105 bits (262), Expect = 6e-28
 Identities = 70/200 (35%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 7   RAQQKEKTRRSLIDAAFSQLSADRSFSNLSLREVAREAGIAPTSFYRHFKDMDELGLTMV 66
           RA+QK +TR++L+DAA   + + R F ++SLREVA+ AGI PT FYRHF DMD LGL +V
Sbjct: 4   RAEQKLQTRQALLDAACLLMESGRGFGSISLREVAKTAGIVPTGFYRHFSDMDALGLALV 63

Query: 67  DEGGLLLRQLMRQARQRIVKEGSVIRTSVETFMEFIESSPNVFRLLLRERSGTSCEFRAA 126
            E     RQ +R  RQ   + G +   SV  F++ + +    F  L RE+ G +   R A
Sbjct: 64  AEIDTTFRQTIRLVRQNEFELGGITDASVRIFLDVVAAHRAQFLFLAREQYGGAQAVRQA 123

Query: 127 VVREIQHFAAELTEYLVA----TGMTREEAMTQAEASVTLVFSSGAEALDLDRRERDEL- 181
           + R  Q  + +L   L        +        A+  V  VF++  E +D       +  
Sbjct: 124 IARLRQDISDDLATDLARMKRWQHLDSAALAVMADLVVKTVFATLPELIDNPEAGYPQAL 183

Query: 182 --AERLIMQLRMLAKGA-HW 198
              E++  QLR +  GA HW
Sbjct: 184 TPQEKITQQLRFIFVGARHW 203