Pairwise Alignments

Query, 213 a.a., HTH-type transcriptional repressor FabR from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., DNA-binding transcriptional repressor (RefSeq) from Escherichia coli BW25113

 Score =  286 bits (732), Expect = 2e-82
 Identities = 149/204 (73%), Positives = 176/204 (86%), Gaps = 2/204 (0%)

Query: 4   LGIRAQQKEKTRRSLIDAAFSQLSADRSFSNLSLREVAREAGIAPTSFYRHFKDMDELGL 63
           +G+RAQQKEKTRRSL++AAFSQLSA+RSF++LSLREVAREAGIAPTSFYRHF+D+DELGL
Sbjct: 1   MGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGIAPTSFYRHFRDVDELGL 60

Query: 64  TMVDEGGLLLRQLMRQARQRIVKEGSVIRTSVETFMEFIESSPNVFRLLLRERSGTSCEF 123
           TMVDE GL+LRQLMRQARQRI K GSVIRTSV TFMEFI ++PN FRLLLRERSGTS  F
Sbjct: 61  TMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAAF 120

Query: 124 RAAVVREIQHFAAELTEYL-VATGMTREEAMTQAEASVTLVFSSGAEALDLDRRERDELA 182
           RAAV REIQHF AEL +YL +   M R     QAEA VT+VFS+GAEALD+   +R +L 
Sbjct: 121 RAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTIVFSAGAEALDVGVEQRRQLE 180

Query: 183 ERLIMQLRMLAKGA-HWYRKERER 205
           ERL++QLRM++KGA +WYR+E+E+
Sbjct: 181 ERLVLQLRMISKGAYYWYRREQEK 204