Pairwise Alignments

Query, 286 a.a., RNA polymerase sigma factor RpoH from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., RNA polymerase sigma factor RpoH from Vibrio cholerae E7946 ATCC 55056

 Score =  567 bits (1461), Expect = e-166
 Identities = 286/286 (100%), Positives = 286/286 (100%)

Query: 1   MTNQAYPMALVSQDSLDSYIRSVNGYPMLSADEERELAERLHYKGDIDAAKGLILSHLRF 60
           MTNQAYPMALVSQDSLDSYIRSVNGYPMLSADEERELAERLHYKGDIDAAKGLILSHLRF
Sbjct: 1   MTNQAYPMALVSQDSLDSYIRSVNGYPMLSADEERELAERLHYKGDIDAAKGLILSHLRF 60

Query: 61  VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEYVLRN 120
           VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEYVLRN
Sbjct: 61  VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEYVLRN 120

Query: 121 WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPAEVREMESRLAAQDA 180
           WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPAEVREMESRLAAQDA
Sbjct: 121 WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPAEVREMESRLAAQDA 180

Query: 181 AFEMSAEDDENGMAYTAPVLYLEDKHSDLADNLEAENWEAHTTQRLSMALASLDERSQHI 240
           AFEMSAEDDENGMAYTAPVLYLEDKHSDLADNLEAENWEAHTTQRLSMALASLDERSQHI
Sbjct: 181 AFEMSAEDDENGMAYTAPVLYLEDKHSDLADNLEAENWEAHTTQRLSMALASLDERSQHI 240

Query: 241 VRARWLDDDNKTTLQDLAEMYGVSAERIRQLEKNAMRKLKEAVGEF 286
           VRARWLDDDNKTTLQDLAEMYGVSAERIRQLEKNAMRKLKEAVGEF
Sbjct: 241 VRARWLDDDNKTTLQDLAEMYGVSAERIRQLEKNAMRKLKEAVGEF 286