Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., GTPase component of the signal recognition particle (SRP) from Pseudomonas putida KT2440

 Score =  152 bits (383), Expect = 2e-41
 Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 21/297 (7%)

Query: 89  FARLKRSLSRTKANIGAGFFGLFKGKKIDDDLFEELEE---QLLIADVGMDTTSKIIANL 145
           F  L   LS+T  ++        K K  +D++ + L E    LL ADV +      + ++
Sbjct: 2   FENLTDRLSQTLRHVTG------KAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSV 55

Query: 146 TARAS----RQQLRDGEALYGLLKEEMAEILSQVEQPLVIDTEKKPYVILMVGVNGVGKT 201
             RA      + L  G+A   +++ E+  ++    + L ++    P V+LM G+ G GKT
Sbjct: 56  KDRAVGTEVSRSLTPGQAFVKIVQAELESLMGAANEDLALNAAP-PAVVLMAGLQGAGKT 114

Query: 202 TTIGKLAKQFQAQGKK-VMLAAGDTFRAAAVEQLQVWGERNQVPVIAQHTGADSASVIYD 260
           TT GKLA+  + + KK VM+ + D +R AA++QL+       V            ++   
Sbjct: 115 TTAGKLARFLKERKKKSVMVVSADVYRPAAIKQLETLANDIGVTFFPSDISQKPVAIAEA 174

Query: 261 AIEAAKARGIDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAGTGQN 320
           AI  AK + IDVVI DTAGRL   +++M+E++ +   +K      P E +  +DA TGQ+
Sbjct: 175 AIREAKLKFIDVVIVDTAGRLHIDADMMDEIKALHAAVK------PIETLFVVDAMTGQD 228

Query: 321 AISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFQIPIRYIGVGEKIDDLRPF 377
           A + AK F +  P+TG+ LTK+DG A+GG   ++      PI++IG+GEK + L PF
Sbjct: 229 AANTAKAFGEALPLTGVVLTKVDGDARGGAALSVRAITGKPIKFIGMGEKTEALEPF 285