Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  148 bits (374), Expect = 3e-40
 Identities = 94/264 (35%), Positives = 139/264 (52%), Gaps = 12/264 (4%)

Query: 119 DLFEELEEQLLIADVGMDTTSKIIANLTARASRQQ----LRDGEALYGLLKEEMAEILSQ 174
           D+  E+   LL ADV +      IA +  +A  Q+    L  G+AL G++  E+A  +  
Sbjct: 29  DMLREVRMALLEADVALPVVRDFIARVKDKALGQEVVGSLTPGQALVGIVHRELAATMGD 88

Query: 175 VEQPLVIDTEKKPYVILMVGVNGVGKTTTIGKLAKQF-QAQGKKVMLAAGDTFRAAAVEQ 233
               + +  +  P VILM G+ G GKTTT  KLAK   + + KKV+  +GD +R AA+EQ
Sbjct: 89  GVADINLAAQP-PAVILMAGLQGAGKTTTTAKLAKHLIEKRKKKVLTVSGDVYRPAAIEQ 147

Query: 234 LQVWGERNQVPVIAQHTGADSASVIYDAIEAAKARGIDVVIADTAGRLQNKSNLMEELRK 293
           L+    +                +   AI+ A+    DV++ DTAGRL     LM E+++
Sbjct: 148 LKTVTAQAGAEWFPSTPDQKPVDIARAAIDHARKHYFDVLLVDTAGRLAIDEALMREIQE 207

Query: 294 IVRVMKKIDDSAPHEIMLTLDAGTGQNAISQAKLFSDVAPITGITLTKLDGTAKGGVIFA 353
           +  V+K      P E +  +DA  GQ+AI+ A+ F D  P+TGI LTKLDG ++GG   +
Sbjct: 208 LHAVLK------PVETLFVVDAMQGQDAINTARAFKDALPLTGIVLTKLDGDSRGGAALS 261

Query: 354 IADQFQIPIRYIGVGEKIDDLRPF 377
           +      PI++ GV EKID L  F
Sbjct: 262 VRQVTGAPIKFAGVSEKIDGLEVF 285