Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  158 bits (399), Expect = 3e-43
 Identities = 99/297 (33%), Positives = 160/297 (53%), Gaps = 21/297 (7%)

Query: 89  FARLKRSLSRTKANIGAGFFGLFKGKKIDDDLFEELEE---QLLIADVGMDTTSKIIANL 145
           F  L   LSRT  NI        +G+  +D++ E L E    LL ADV +    + I  +
Sbjct: 2   FDNLTDRLSRTLRNISG------RGRLTEDNVKETLREVRMALLEADVALPVVREFINRV 55

Query: 146 TARAS----RQQLRDGEALYGLLKEEMAEILSQVEQPLVIDTEKKPYVILMVGVNGVGKT 201
             +A      + L  G+    +++ E+   + +  Q L +  +  P V+LM G+ G GKT
Sbjct: 56  KEKAVGHEVNKSLTPGQEFVKIVRSELVAAMGEENQTLNLAAQP-PAVVLMAGLQGAGKT 114

Query: 202 TTIGKLAKQFQAQGKK-VMLAAGDTFRAAAVEQLQVWGERNQVPVIAQHTGADSASVIYD 260
           T++GKL K  + + KK V++ + D +R AA++QL+   E+  V       G     ++  
Sbjct: 115 TSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNA 174

Query: 261 AIEAAKARGIDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAGTGQN 320
           A++ AK +  DV++ DTAGRL     +M+E++++   +K      P E +  +DA TGQ+
Sbjct: 175 ALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASIK------PVETLFVVDAMTGQD 228

Query: 321 AISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFQIPIRYIGVGEKIDDLRPF 377
           A + AK F++  P+TG+ LTK+DG A+GG   +I      PI+++GVGEK D L PF
Sbjct: 229 AANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPF 285