Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 497 a.a., fused Signal Recognition Particle (SRP) receptor: membrane binding protein/conserved protein (NCBI) from Escherichia coli BW25113

 Score =  489 bits (1260), Expect = e-143
 Identities = 261/371 (70%), Positives = 301/371 (81%), Gaps = 18/371 (4%)

Query: 37  QADVEAVAIQTETALTETETETETETETETETETATVEPARIV---------------EQ 81
           QA+ E V I  E A  E   E  T+ E ET       E A +V               EQ
Sbjct: 129 QAEAETVEI-VEAAEEEAAKEEITDEELETALAAEAAEEAVMVVPPAEEEQPVEEIAQEQ 187

Query: 82  EKPT-ESFFARLKRSLSRTKANIGAGFFGLFKGKKIDDDLFEELEEQLLIADVGMDTTSK 140
           EKPT E FFARLKRSL +TK N+G+GF  LF+GKKIDDDLFEELEEQLLIADVG++TT K
Sbjct: 188 EKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTRK 247

Query: 141 IIANLTARASRQQLRDGEALYGLLKEEMAEILSQVEQPLVIDTEKKPYVILMVGVNGVGK 200
           II NLT  ASR+QLRD EALYGLLKEEM EIL++V++PL ++  K P+VILMVGVNGVGK
Sbjct: 248 IITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEG-KAPFVILMVGVNGVGK 306

Query: 201 TTTIGKLAKQFQAQGKKVMLAAGDTFRAAAVEQLQVWGERNQVPVIAQHTGADSASVIYD 260
           TTTIGKLA+QF+ QGK VMLAAGDTFRAAAVEQLQVWG+RN +PVIAQHTGADSASVI+D
Sbjct: 307 TTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFD 366

Query: 261 AIEAAKARGIDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAGTGQN 320
           AI+AAKAR IDV+IADTAGRLQNKS+LMEEL+KIVRVMKK+D  APHE+MLT+DA TGQN
Sbjct: 367 AIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQN 426

Query: 321 AISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFQIPIRYIGVGEKIDDLRPFATQ 380
           A+SQAKLF +   +TGITLTKLDGTAKGGVIF++ADQF IPIRYIGVGE+I+DLRPF   
Sbjct: 427 AVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKAD 486

Query: 381 EFIDALFSREE 391
           +FI+ALF+RE+
Sbjct: 487 DFIEALFARED 497



 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 1  MTEKKKRGLLSWLGFGDEEKSQTTATDTQTQDEPQSQADVEAVAIQTETALTETETETET 60
          M ++KKRG  SWLGFG  +K QT   +T+ Q+E       E V  Q     +E   E + 
Sbjct: 1  MAKEKKRGFFSWLGFG--QKEQTPEKETEVQNE--QPVVEEIVQAQEPVKASEQAVEEQP 56

Query: 61 ETETETETETATVEPARIVEQEKPTE 86
          +  TE E ET   +   + EQ   +E
Sbjct: 57 QAHTEAEAETFAADVVEVTEQVAESE 82