Pairwise Alignments

Query, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., Signal Recognition Particle (SRP) receptor from Escherichia coli BL21

 Score =  488 bits (1255), Expect = e-142
 Identities = 261/374 (69%), Positives = 304/374 (81%), Gaps = 15/374 (4%)

Query: 32  DEPQSQAD-VEAVAIQTETALTETETETETETET----ETETETATVEPAR--------I 78
           +E Q++A+ VE V    E A  E  T+ E E +       E     V PA          
Sbjct: 126 EEWQAEAETVEIVEAAQEEAAKEEITDEELEAQALAAEAAEEAVMVVPPAEEEQPVEEIA 185

Query: 79  VEQEKPT-ESFFARLKRSLSRTKANIGAGFFGLFKGKKIDDDLFEELEEQLLIADVGMDT 137
            EQEKPT E FFARLKRSL +TK N+G+GF  LF+GKKIDDDLFEELEEQLLIADVG++T
Sbjct: 186 QEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVET 245

Query: 138 TSKIIANLTARASRQQLRDGEALYGLLKEEMAEILSQVEQPLVIDTEKKPYVILMVGVNG 197
           T KII NLT  ASR+QLRD EALYGLLKEEM EIL++V++PL ++  K P+VILMVGVNG
Sbjct: 246 TRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEG-KTPFVILMVGVNG 304

Query: 198 VGKTTTIGKLAKQFQAQGKKVMLAAGDTFRAAAVEQLQVWGERNQVPVIAQHTGADSASV 257
           VGKTTTIGKLA+QF+ QGK VMLAAGDTFRAAAVEQLQVWG+RN +PVIAQHTGADSASV
Sbjct: 305 VGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASV 364

Query: 258 IYDAIEAAKARGIDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAGT 317
           I+DAI+AAKAR IDV+IADTAGRLQNKS+LMEEL+KIVRVMKK+D  APHE+MLT+DA T
Sbjct: 365 IFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDAST 424

Query: 318 GQNAISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFQIPIRYIGVGEKIDDLRPF 377
           GQNA+SQAKLF +   +TGITLTKLDGTAKGGVIF++ADQF IPIRYIGVGE+I+DLRPF
Sbjct: 425 GQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPF 484

Query: 378 ATQEFIDALFSREE 391
              +FI+ALF+RE+
Sbjct: 485 KADDFIEALFARED 498



 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 1  MTEKKKRGLLSWLGFGDEEKSQTTATDTQTQDEPQSQADVEAVAIQTETALTETETETET 60
          M ++KKRG  SWLGFG  +K QT   +T+ Q+E       E V  Q     +E   E + 
Sbjct: 1  MAKEKKRGFFSWLGFG--QKEQTPEKETEVQNE--QPVVEEIVQAQEPVKASEQAVEEQP 56

Query: 61 ETETETETETATVEPARIVEQEKPTE 86
          +  TE E ET   +   + EQ   +E
Sbjct: 57 QAHTEAEAETFAADVVEVTEQVAESE 82