Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 10/116 (8%)

Query: 53  WLAQEVPNARCLDLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIEL 112
           WLA + P+ R LDLF G G      A RQ  +V  +E      ++   N  S    N++ 
Sbjct: 299 WLAPQ-PDERVLDLFCGLGNFALPLA-RQVREVVAVEGVQTMVERAAVNAVSNDLHNVQF 356

Query: 113 IHTD---ALAFLRQSGKPYDVVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIEC 165
              D    L     + + +  V +DPP R G L+   +L      L  + ++Y+ C
Sbjct: 357 FQADLSQPLTDAEWAKQGFSAVLLDPP-RDGALEVVRKL----ATLGAKRLVYVSC 407