Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 10/137 (7%)

Query: 42  TTDRVKETLF----NWLAQEVPNARCLDLFAGSGGLGFECASRQANQVTMLELNPLAFQQ 97
           T  +V E L+     W+ +E+   +  DLF G GG    CA+     VT +E+ P A   
Sbjct: 213 TNPKVAEQLYATARTWV-REIAPTQMWDLFCGVGGFALHCAAPD-TAVTGIEIEPEAIAS 270

Query: 98  LKTNVQSLKAENIELIHTDALAFLRQSGKPYDVVFIDPPFRQGLLQETTQLLEQNGWLAP 157
            + + Q +  +N+     D+  F +      ++V ++PP R+GL  E T  LE    LAP
Sbjct: 271 AQRSAQMMGIDNLSFAALDSAKFSQSQMSAPELVLVNPP-RRGLGSELTAQLEA---LAP 326

Query: 158 QAMIYIECEKELPLTEL 174
           + ++Y  C  +  + ++
Sbjct: 327 KYILYSSCNPQTMVKDI 343