Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 184 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) from Sphingobium sp. HT1-2

 Score = 92.8 bits (229), Expect = 3e-24
 Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 5/152 (3%)

Query: 19  VRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCL---DLFAGSGGLGF 75
           +RIISG WRGR L     +  RPT DR +ETLF+ LA  + +   L   D FAGSG LGF
Sbjct: 1   MRIISGQWRGRPLVAPKGDATRPTGDRTRETLFSMLASRLGSFEGLAVGDFFAGSGALGF 60

Query: 76  ECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFLRQSGKPYDVVFIDP 135
           E  SR A     +E +  A   ++ N   L     ++  T  L+ L  +  P D++F+DP
Sbjct: 61  EALSRGAGSCLFVEQDKAAIDAIRANGDKLGLRP-DIRQTSVLS-LGPTKTPLDLIFMDP 118

Query: 136 PFRQGLLQETTQLLEQNGWLAPQAMIYIECEK 167
           P+  G  Q     L + GW +P   I IE ++
Sbjct: 119 PYDTGAGQVALDKLARLGWTSPATWISIETDR 150