Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Ralstonia solanacearum PSI07

 Score =  134 bits (337), Expect = 1e-36
 Identities = 84/212 (39%), Positives = 117/212 (55%), Gaps = 23/212 (10%)

Query: 3   RRRQPNPSQKKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNAR 62
           R + P+ +       QVRII G ++   LPV DAEGLRPT DRV+ETLFNWL Q++   R
Sbjct: 8   RPKTPSATSHARAPHQVRIIGGQYKRTPLPVIDAEGLRPTGDRVRETLFNWLGQDLAGWR 67

Query: 63  CLDLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFL- 121
           C D+FAG+G LGFE ASR A QVT++E +  A + L      L+A  ++++  DA A+L 
Sbjct: 68  CADIFAGTGALGFEAASRGAEQVTLVENHAPALRALHAVRDKLRAGMVDIVQGDAFAWLA 127

Query: 122 RQSGKPYDVVFIDPPFRQG----LLQETTQLLEQNGWLAPQAMIYIECEKELPLT----- 172
           RQ+   +D+VFIDPPF Q      L+   +++ + G      +IY+E  + L        
Sbjct: 128 RQADGAFDLVFIDPPFAQDWALRALEAALRVVPEGG------LIYVELPRPLVAAVPGEG 181

Query: 173 -------ELPPHWHLHREKSAGQVCYRLFIRE 197
                   LP    LHR   AG V   L +R+
Sbjct: 182 VAPEVGIPLPAGVVLHRHLRAGAVHAHLLLRK 213