Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 198 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  224 bits (571), Expect = 8e-64
 Identities = 109/184 (59%), Positives = 136/184 (73%)

Query: 16  TGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCLDLFAGSGGLGF 75
           +GQ+RII G WRGRKLPV D+ GLRPTTDRV+ETLFNWLA  + +A CLD FAGSG LG 
Sbjct: 9   SGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVMVDAHCLDCFAGSGALGL 68

Query: 76  ECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFLRQSGKPYDVVFIDP 135
           E  SR A Q T+LE++    QQL+ N+ +LKA N  +++T+ L FL Q G P+ VVF+DP
Sbjct: 69  EALSRYAAQATLLEMDRAVSQQLQKNLATLKANNARVVNTNTLTFLSQPGTPHHVVFVDP 128

Query: 136 PFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELPPHWHLHREKSAGQVCYRLFI 195
           PFR+GLL+ET QLLE  GWLA  A+IY+E E E  L  +P +W L+REK AGQV YRL+ 
Sbjct: 129 PFRKGLLEETLQLLETQGWLADDALIYVESEVENGLPPVPANWALYREKVAGQVAYRLYQ 188

Query: 196 REEQ 199
           R+ Q
Sbjct: 189 RDAQ 192