Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 198 a.a., predicted methyltransferase (NCBI) from Escherichia coli BW25113

 Score =  226 bits (575), Expect = 3e-64
 Identities = 110/195 (56%), Positives = 144/195 (73%), Gaps = 4/195 (2%)

Query: 5   RQPNPSQKKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCL 64
           ++PN S     +GQ+RII G WRGRKLPV D+ GLRPTTDRV+ETLFNWLA  + +A+CL
Sbjct: 2   KKPNHSG----SGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCL 57

Query: 65  DLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFLRQS 124
           D FAGSG LG E  SR A   T++E++    QQL  N+ +LKA N  +++++A++FL Q 
Sbjct: 58  DCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQK 117

Query: 125 GKPYDVVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELPPHWHLHREK 184
           G P+++VF+DPPFR+GLL+ET  LLE NGWLA +A+IY+E E E  L  +P +W LHREK
Sbjct: 118 GTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREK 177

Query: 185 SAGQVCYRLFIREEQ 199
            AGQV YRL+ RE Q
Sbjct: 178 VAGQVAYRLYQREAQ 192