Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., 23S rRNA m(5)U747-methyltransferase (NCBI) from Escherichia coli BW25113

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 9/130 (6%)

Query: 49  TLFNWLAQEVPNARCLDLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAE 108
           T  +W+ Q +P     DLF G GG G  CA+    Q+T +E+   A    K +   L   
Sbjct: 224 TARDWVRQ-LPVKHMWDLFCGVGGFGLHCATPDM-QLTGIEIASEAIACAKQSAAELGLT 281

Query: 109 NIELIHTDALAFLRQSGKPYDVVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKE 168
            ++    D+  F    G   ++V ++PP R+G+ +     L     +AP+ +IY  C  +
Sbjct: 282 RLQFQALDSTQFATAQGDVPELVLVNPP-RRGIGKPLCDYLST---MAPRFIIYSSCNAQ 337

Query: 169 L---PLTELP 175
                + ELP
Sbjct: 338 TMAKDIRELP 347