Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Erwinia tracheiphila SCR3

 Score = 46.2 bits (108), Expect = 7e-10
 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 65  DLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFLRQS 124
           DLF G GG G  CAS +  Q+T +E++  A    + +  ++K + +     D+  F    
Sbjct: 239 DLFCGVGGFGLHCASPEM-QLTGIEISAEAINCARRSATAMKLDKVSFAALDSTDFASGE 297

Query: 125 GKPYDVVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKE 168
               ++V ++PP R+G+  +  Q L   G   P+ ++Y  C  +
Sbjct: 298 NATPELVLVNPP-RRGIGAQLCQWLSSMG---PKWILYSSCNAQ 337