Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 200 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Enterobacter asburiae PDN3

 Score =  234 bits (597), Expect = 8e-67
 Identities = 114/195 (58%), Positives = 143/195 (73%), Gaps = 4/195 (2%)

Query: 5   RQPNPSQKKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCL 64
           ++PN    +AP GQ+RII G WRGRKLPV D+ GLRPTTDRV+ETLFNWLA  + +A CL
Sbjct: 2   KKPN----RAPAGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPSMVDAHCL 57

Query: 65  DLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFLRQS 124
           D FAGSG LG E  SR A   T+LE+     Q L+ N+ +LKA N ++++T+ L+FL Q 
Sbjct: 58  DCFAGSGALGLEALSRYAASATLLEMERGVAQTLQQNLATLKASNAKVVNTNTLSFLAQK 117

Query: 125 GKPYDVVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELPPHWHLHREK 184
           G P++VVF+DPPFR+GLL+ET  LLEQNGWLA  A+IY+E E E  L  +P HW LHREK
Sbjct: 118 GTPHNVVFVDPPFRKGLLEETLSLLEQNGWLADDALIYVESEVENGLPPVPTHWDLHREK 177

Query: 185 SAGQVCYRLFIREEQ 199
            AGQV YRL+ R+ Q
Sbjct: 178 VAGQVAYRLYHRQAQ 192