Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Dickeya dianthicola ME23

 Score = 50.4 bits (119), Expect = 4e-11
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 8/130 (6%)

Query: 42  TTDRVKETLFNWLAQEV---PNARCLDLFAGSGGLGFECASRQANQVTMLELNPLAFQQL 98
           T  +V   L++   Q V   P     DLF G GG G  CAS +   +T +E++P A    
Sbjct: 213 TNPQVAAALYDAARQWVSALPVRSLWDLFCGVGGFGLHCASPET-PLTGIEISPEAIDCA 271

Query: 99  KTNVQSLKAENIELIHTDALAFLRQSGKPYDVVFIDPPFRQGLLQETTQLLEQNGWLAPQ 158
           + +   L   N+     D+  F     +  D+V ++PP R+G+  E    L +   +AP 
Sbjct: 272 RRSAVQLGLTNVSFAALDSTRFAVGEARTPDLVIVNPP-RRGIGAELCDYLSR---MAPP 327

Query: 159 AMIYIECEKE 168
            ++Y  C  E
Sbjct: 328 YLLYSSCNAE 337