Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase from Dickeya dadantii 3937

 Score =  215 bits (548), Expect = 4e-61
 Identities = 107/188 (56%), Positives = 132/188 (70%), Gaps = 2/188 (1%)

Query: 11  QKKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCLDLFAGS 70
           Q  +  GQ+RII G WRGRKLPV D+ GLRPTTDRV+ETLFNWLA  +  +RCLD FAGS
Sbjct: 5   QATSAPGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIQQSRCLDCFAGS 64

Query: 71  GGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFLRQ--SGKPY 128
           G LG E  SR A   T+LE      +QL  N+  L+A+N E+++ D L +L +  S +PY
Sbjct: 65  GALGLEALSRYAAHATLLEAERNVARQLTQNLSLLRADNAEVVNADTLQWLAKPASAQPY 124

Query: 129 DVVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELPPHWHLHREKSAGQ 188
           DVVF+DPPFR+GLL +T +LLE  GWLA +  IYIE E E     +PP W LHREK+AGQ
Sbjct: 125 DVVFLDPPFRRGLLDDTLRLLETGGWLAQETWIYIETEAENRTLAIPPTWTLHREKTAGQ 184

Query: 189 VCYRLFIR 196
           V YRL+IR
Sbjct: 185 VSYRLYIR 192