Pairwise Alignments

Query, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., 23S rRNA m(5)U747 methyltransferase, SAM-dependent from Escherichia coli BL21

 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 6/120 (5%)

Query: 49  TLFNWLAQEVPNARCLDLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAE 108
           T  +W+ Q +P     DLF G GG G  CA+    Q+T +E+ P A    K +   L   
Sbjct: 224 TARDWVRQ-LPVKHMWDLFCGVGGFGLHCATPDM-QLTGIEIAPEAIACAKQSAAELGLT 281

Query: 109 NIELIHTDALAFLRQSGKPYDVVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKE 168
            ++    D+  F    G+  ++V ++PP R+G+ +     L     +AP+ +IY  C  +
Sbjct: 282 RLQFQALDSTQFATAQGEVPELVLVNPP-RRGIGKPLCDYLST---MAPRFIIYSSCNAQ 337