Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., amino acid transporter LysE from Pseudomonas simiae WCS417

 Score =  104 bits (259), Expect = 1e-27
 Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 4/203 (1%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M +  WL +   A++  L PG  ++  ISN L+YG R S  A +G      C +    +G
Sbjct: 1   MTLETWLLFSGAALIVILIPGPLSLLMISNSLNYGLRRSYPAFLGGVFASICLLSASALG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKW-RDRAPLTATTTSHELSQ---AALLRKAV 116
           +GAL+  S   F+ +K +GA YL +L  Q W + R P         ++     AL  +A 
Sbjct: 61  LGALLLASEQVFSALKIVGALYLFYLAWQSWQQSRQPSQGAVVPQAIATPRFRALFGRAF 120

Query: 117 LINLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYI 176
           ++  +NPK I+F  A  PQF++  +    Q LV+  T   +D +    Y   A    RY+
Sbjct: 121 VLGASNPKDILFFAAFLPQFLNREQPFLSQLLVMIATWAMLDLLCKLAYGLGAQGAARYL 180

Query: 177 RSPNIMTRMNKLFGSMFMGCGML 199
           RS N  +  N++   +F G G++
Sbjct: 181 RSGNGQSWFNRVSAGLFGGAGVM 203