Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., Homoserine/homoserine lactone efflux protein from Variovorax sp. SCN45

 Score =  108 bits (269), Expect = 9e-29
 Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 5/181 (2%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M +   L + + A      PG   + ++SNG  +G R +L  ++G  +     +  V +G
Sbjct: 1   MTLATALLFAIVAFAAIATPGPTVLLALSNGSRHGVRRALPGMLGAVLSDFVLVGAVALG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATTTSHELSQAA-----LLRKA 115
           +GAL+A S   F+++KW+GA YL WLG++  R +      T     S  A     +  K+
Sbjct: 61  LGALLAASEFWFSMLKWVGAVYLAWLGLRMLRSKGGFQLPTADAAASVTAGESRRIFFKS 120

Query: 116 VLINLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRY 175
            L+ +TNPK  +F  AL PQFIDPT    PQ++V+ +    +D  VM  Y  + A+  R 
Sbjct: 121 FLVAVTNPKGYIFCSALLPQFIDPTAAQAPQYIVIALIFAALDMAVMLAYAFVGARAIRL 180

Query: 176 I 176
           +
Sbjct: 181 L 181