Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 213 a.a., L-lysine permease from Variovorax sp. SCN45

 Score =  180 bits (457), Expect = 1e-50
 Identities = 93/208 (44%), Positives = 134/208 (64%), Gaps = 10/208 (4%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M++HVWLA+L+ + V +++PGSG V S+S+GLSYG R +   I+GLQ+GLA  +++ G+G
Sbjct: 1   MELHVWLAFLVASCVIAVSPGSGAVLSMSHGLSYGVRRTTATIVGLQLGLAVILLVAGLG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATTTSH--------ELSQAALL 112
           +GA++  SA AFT+IK +GA YL+WLG ++W  RAP+    ++         +L+    +
Sbjct: 61  VGAVLTASATAFTVIKVVGACYLLWLGWRQW--RAPVAPAASADGGEAAREPDLTAPQRV 118

Query: 113 RKAVLINLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQL 172
            +  L N+TNPK IVF+ A+ PQFI PTR  W Q LVL  TTV +D  VM GY  LAA+L
Sbjct: 119 LRGFLTNVTNPKGIVFMAAVLPQFIQPTRPLWLQLLVLLATTVMVDVTVMHGYAWLAARL 178

Query: 173 GRYIRSPNIMTRMNKLFGSMFMGCGMLL 200
              +RS       N++FG + M  G  L
Sbjct: 179 QGVLRSVRARRAQNRVFGGVLMTMGAFL 206