Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

 Score = 92.4 bits (228), Expect = 5e-24
 Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 5/209 (2%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M I  + A+ +   + +L PG  T   I N    G        +G+  GL  H     IG
Sbjct: 1   MVIQNFEAFFIAITILTLTPGLDTALVIRNTSRAGFADGCTTSLGICFGLFVHATFSAIG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRD-----RAPLTATTTSHELSQAALLRKA 115
           I A++AQSA  F ++K +GAAYL+WLGI   R      +    A+    +      LR+ 
Sbjct: 61  ISAILAQSAELFQIVKMVGAAYLIWLGISSLRSLMKTGQGIEVASLAHAQFRLTRSLREG 120

Query: 116 VLINLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRY 175
            L N+ NPK+ VF +A  PQFI+P      Q L++ +    I  +   G     +     
Sbjct: 121 FLSNVLNPKTAVFYLAFLPQFINPDYSPLAQSLLMALIHFAIAMVWQCGLAGALSSAKNL 180

Query: 176 IRSPNIMTRMNKLFGSMFMGCGMLLATAK 204
           +++ + M  M    G + +  G+ L   K
Sbjct: 181 LKNASFMRWMEGTTGVVLVALGIKLLLEK 209